Transcript: ENSDART00000143323.3 smim29-203

Description

small integral membrane protein 29 [Source:ZFIN;Acc:ZDB-GENE-031118-211]

Gene Synonyms

si:dkey-226k3.4, wu:fc84a10

Location

Chromosome 23: 3,721,042-3,740,415 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 117 variant alleles and maps to 91 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000090634.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141782.2	smim29-201	821	102aa	ENSDARP00000117009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EZ47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185982.1	smim29-204	891	102aa	ENSDARP00000150589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EZ47	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143323.3	smim29-203	761	80aa	ENSDARP00000114373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QB80	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141880.3	smim29-202	757	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 761 bps, Translation length: 80 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143323.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143323.3 smim29-203

Summary

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Transcript: ENSDART00000143323.3 smim29-203

Summary

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