Transcript: ENSDART00000143280.2 sh2b1-203

Description

SH2B adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070209-188]

Gene Synonyms

zgc:158474

Location

About this transcript

This transcript has 2 exons, is annotated with 11 domains and features, is associated with 96 variant alleles and maps to 84 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141808.3	sh2b1-202	4210	906aa	ENSDARP00000115931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RUZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000083976.4	sh2b1-201	3596	906aa	ENSDARP00000078411.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RUZ0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143280.2	sh2b1-203	882	109aa	ENSDARP00000118660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 882 bps, Translation length: 109 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143280.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.