Transcript: ENSDART00000143276.3 SETBP1-201

Description

SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]

Location

About this transcript

This transcript has 4 exons, is annotated with 34 domains and features, is associated with 1384 variant alleles and maps to 144 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143276.3	SETBP1-201	4966	1438aa	ENSDARP00000112840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R147	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000166902.2	SETBP1-202	4609	1438aa	ENSDARP00000133167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R147	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 4,966 bps, Translation length: 1,438 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143276.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.