Transcript: ENSDART00000143200.2 KCNMA1-204

Description

potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]

Location

Chromosome 13: 16,522,659-16,886,117 forward strand.

About this transcript

This transcript has 29 exons, is annotated with 54 domains and features, is associated with 3423 variant alleles and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000079840.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143200.2	KCNMA1-204	3823	1184aa	ENSDARP00000118939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZC96	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000122557.3	KCNMA1-205	4328	1205aa	ENSDARP00000105964.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYL4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182838.1	KCNMA1-206	3690	1229aa	ENSDARP00000155995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QRZ7	-
ENSDART00000139893.2	KCNMA1-203	857	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000140278.2	KCNMA1-201	849	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000126736.3	KCNMA1-202	725	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 3,823 bps, Translation length: 1,184 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: B7ZC96

Version

ENSDART00000143200.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000143200.2 KCNMA1-204

Summary

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Transcript: ENSDART00000143200.2 KCNMA1-204

Summary

About Us

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