Transcript: ENSDART00000143180.2 dnmt3bb.3-206

Description

DNA (cytosine-5-)-methyltransferase beta, duplicate b.3 [Source:ZFIN;Acc:ZDB-GENE-050314-2]

Location

Chromosome 23: 16,979,462-16,981,985 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 193 variant alleles and maps to 212 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057863.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142297.3	dnmt3bb.3-205	4418	1296aa	ENSDARP00000118597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3QJU7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000046889.8	dnmt3bb.3-201	3891	1296aa	ENSDARP00000046888.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3QJU7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125472.4	dnmt3bb.3-202	1689	399aa	ENSDARP00000106490.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143180.2	dnmt3bb.3-206	771	215aa	ENSDARP00000122655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148072.3	dnmt3bb.3-207	883	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000141651.2	dnmt3bb.3-204	782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137329.2	dnmt3bb.3-203	599	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 771 bps, Translation length: 215 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143180.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143180.2 dnmt3bb.3-206

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Transcript: ENSDART00000143180.2 dnmt3bb.3-206

Summary

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