Transcript: ENSDART00000143164.3 ASPN-201

Description

asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]

Location

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 242 variant alleles and maps to 128 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064798.6	ASPN-202	1938	370aa	ENSDARP00000064797.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LXA7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143164.3	ASPN-201	1253	161aa	ENSDARP00000120729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184366.1	ASPN-203	1116	370aa	ENSDARP00000153024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LXA7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,253 bps, Translation length: 161 residues

Version

ENSDART00000143164.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.