Transcript: ENSDART00000143162.2 TM7SF2-203

Description

transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]

Gene Synonyms

zgc:103611

Location

Chromosome 10: 26,973,063-26,977,197 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 24 domains and features, is associated with 277 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000032816.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000042162.8	TM7SF2-202	1601	421aa	ENSDARP00000042161.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186210.1	TM7SF2-204	1281	421aa	ENSDARP00000144985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143162.2	TM7SF2-203	1050	335aa	ENSDARP00000115191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147302.2	TM7SF2-201	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,050 bps, Translation length: 335 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143162.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143162.2 TM7SF2-203

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Transcript: ENSDART00000143162.2 TM7SF2-203

Summary

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