Transcript: ENSDART00000143142.2 zgc:111983-203

Description

zgc:111983 [Source:ZFIN;Acc:ZDB-GENE-050417-335]

Gene Synonyms

fi32a11, wu:fb09a02, wu:fi32a11, zgc:56382

Location

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 11 variant alleles and maps to 107 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034549.7	zgc:111983-201	1969	437aa	ENSDARP00000035524.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q567K3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143142.2	zgc:111983-203	211	24aa	ENSDARP00000120857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2AWA2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136995.2	zgc:111983-202	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 211 bps, Translation length: 24 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143142.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.