Transcript: ENSDART00000143120.2 fbxo44.9-203

Description

F-box protein 44, tandem duplicate 9 [Source:ZFIN;Acc:ZDB-GENE-061009-29]

Location

Chromosome 23: 16,935,494-16,938,403 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 347 variant alleles and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000071029.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162292.2	fbxo44.9-204	1058	323aa	ENSDARP00000130853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000080625.6	fbxo44.9-201	909	302aa	ENSDARP00000075071.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RDW8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000143120.2	fbxo44.9-203	776	253aa	ENSDARP00000116314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000138635.2	fbxo44.9-202	375	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 776 bps, Translation length: 253 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000143120.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143120.2 fbxo44.9-203

Summary

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Transcript: ENSDART00000143120.2 fbxo44.9-203

Summary

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