Transcript: ENSDART00000143118.4 adgrb1b-202

Description

adhesion G protein-coupled receptor B1b [Source:ZFIN;Acc:ZDB-GENE-081031-45]

Gene Synonyms

bai1b, si:ch1073-436c4.1

Location

Chromosome 19: 92,570-103,289 reverse strand.

About this transcript

This transcript has 27 exons, is annotated with 76 domains and features, is associated with 208 variant alleles and maps to 425 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078529.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143118.4	adgrb1b-202	5165	1241aa	ENSDARP00000113424.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P980	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000179342.2	adgrb1b-203	897	298aa	ENSDARP00000144202.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YB45	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000141359.2	adgrb1b-201	925	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 5,165 bps, Translation length: 1,241 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000143118.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143118.4 adgrb1b-202

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Transcript: ENSDART00000143118.4 adgrb1b-202

Summary

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