Transcript: ENSDART00000143113.3 SFSWAP-201

Description

splicing factor SWAP [Source:ZFIN;Acc:ZDB-GENE-040426-931]

Location

About this transcript

This transcript has 18 exons, is annotated with 48 domains and features, is associated with 2535 variant alleles and maps to 345 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143113.3	SFSWAP-201	3660	958aa	ENSDARP00000121684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5L3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141809.2	SFSWAP-202	1206	276aa	ENSDARP00000115086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,660 bps, Translation length: 958 residues

Version

ENSDART00000143113.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.