Transcript: ENSDART00000143085.3 yipf1-203

Description

Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]

Gene Synonyms

zgc:91977

Location

About this transcript

This transcript has 8 exons, is annotated with 22 domains and features, is associated with 165 variant alleles and maps to 148 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000006748.7	yipf1-201	1965	306aa	ENSDARP00000005280.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q68EH1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143085.3	yipf1-203	974	277aa	ENSDARP00000116225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133508.2	yipf1-202	813	197aa	ENSDARP00000120244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 974 bps, Translation length: 277 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143085.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.