Transcript: ENSDART00000143056.3 zyx-201

Description

zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]

Gene Synonyms

zgc:171680

Location

About this transcript

This transcript has 10 exons, is annotated with 35 domains and features, is associated with 679 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143056.3	zyx-201	2114	608aa	ENSDARP00000113371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC03	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144392.2	zyx-202	1976	608aa	ENSDARP00000118075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC03	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147615.3	zyx-203	776	208aa	ENSDARP00000120426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,114 bps, Translation length: 608 residues

Version

ENSDART00000143056.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.