Transcript: ENSDART00000143046.2 dus2-206

Description

dihydrouridine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-233]

Gene Synonyms

dus2l, si:ch73-46g7.4

Location

Chromosome 25: 36,258,300-36,263,115 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 253 variant alleles and maps to 19 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077607.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000179411.2	dus2-207	2294	504aa	ENSDARP00000144296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F220	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139002.3	dus2-204	1942	504aa	ENSDARP00000115556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F220	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143046.2	dus2-206	490	144aa	ENSDARP00000120030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135990.3	dus2-201	826	71aa	ENSDARP00000115791.1	Nonsense mediated decay	-	-
ENSDART00000136738.2	dus2-202	721	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000142887.2	dus2-205	629	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000137354.2	dus2-203	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 490 bps, Translation length: 144 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000143046.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000143046.2 dus2-206

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Transcript: ENSDART00000143046.2 dus2-206

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