Transcript: ENSDART00000143025.3 tatdn3-202

Description

TatD DNase domain containing 3 [Source:NCBI gene;Acc:553592]

Gene Synonyms

si:ch211-147d7.4, zgc:110166

Location

About this transcript

This transcript has 6 exons, is associated with 330 variant alleles and maps to 55 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064692.6	tatdn3-201	1072	266aa	ENSDARP00000127347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAS8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152865.2	tatdn3-203	706	151aa	ENSDARP00000127412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAZ0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000143025.3	tatdn3-202	551	62aa	ENSDARP00000127153.1	Nonsense mediated decay	U3JA88	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 551 bps, Translation length: 62 residues

Version

ENSDART00000143025.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.