Transcript: ENSDART00000142983.3 pnpla7a-202

Description

patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]

Gene Synonyms

clica, zgc:158748

Location

About this transcript

This transcript has 9 exons, is associated with 276 variant alleles and maps to 67 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000091647.6	pnpla7a-201	1315	328aa	ENSDARP00000086080.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L2A9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000184408.1	pnpla7a-206	7134	1354aa	ENSDARP00000145895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F4S2	-
ENSDART00000180323.1	pnpla7a-205	5491	239aa	ENSDARP00000154453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P5J7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151547.3	pnpla7a-203	4314	1354aa	ENSDARP00000125891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F4S2	-
ENSDART00000142983.3	pnpla7a-202	860	173aa	ENSDARP00000123365.2	Nonsense mediated decay	E9QCB6	-
ENSDART00000151617.2	pnpla7a-204	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 860 bps, Translation length: 173 residues

Version

ENSDART00000142983.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]