Transcript: ENSDART00000142974.2 MYO1B-203

Description

myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]

Location

Chromosome 9: 16,139,251-16,140,860 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 17 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000024694.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138204.4	MYO1B-201	5429	1107aa	ENSDARP00000121299.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R617	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131398.2	MYO1B-205	993	166aa	ENSDARP00000118583.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000077187.5	MYO1B-206	772	251aa	ENSDARP00000071655.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190503.1	MYO1B-207	501	166aa	ENSDARP00000149565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142974.2	MYO1B-203	425	142aa	ENSDARP00000118490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000128768.3	MYO1B-202	777	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000141806.2	MYO1B-204	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 425 bps, Translation length: 142 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000142974.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000142974.2 MYO1B-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000142974.2 MYO1B-203

Summary

About Us

Get help

Our sister sites

Follow us