Transcript: ENSDART00000142919.2 SSH1-201

Description

slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]

Location

About this transcript

This transcript has 15 exons, is annotated with 26 domains and features, is associated with 227 variant alleles and maps to 160 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000187340.1	SSH1-202	5924	835aa	ENSDARP00000148898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142919.2	SSH1-201	2377	683aa	ENSDARP00000113202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,377 bps, Translation length: 683 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142919.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.