Transcript: ENSDART00000142885.3 GABPB2-202

Description

GA binding protein transcription factor subunit beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-136]

Location

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 266 variant alleles and maps to 95 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135008.3	GABPB2-201	1890	418aa	ENSDARP00000119865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0D273	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000076528.5	GABPB2-203	1363	418aa	ENSDARP00000071000.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0D273	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142885.3	GABPB2-202	732	230aa	ENSDARP00000117695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 732 bps, Translation length: 230 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142885.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.