Transcript: ENSDART00000142883.3 zgc:153631-203

Description

zgc:153631 [Source:ZFIN;Acc:ZDB-GENE-060825-208]

Location

About this transcript

This transcript has 10 exons, is annotated with 34 domains and features, is associated with 298 variant alleles and maps to 115 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000142883.3	zgc:153631-203	1478	345aa	ENSDARP00000119661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000100014.4	zgc:153631-201	1430	278aa	ENSDARP00000090786.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000146457.3	zgc:153631-205	1101	233aa	ENSDARP00000117794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000187867.1	zgc:153631-206	820	270aa	ENSDARP00000157657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000143718.2	zgc:153631-204	763	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000135925.2	zgc:153631-202	671	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,478 bps, Translation length: 345 residues

Version

ENSDART00000142883.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.