Transcript: ENSDART00000142848.2 SEC22C-201

Description

SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]

Location

About this transcript

This transcript has 7 exons, is annotated with 28 domains and features, is associated with 182 variant alleles and maps to 123 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000188362.1	SEC22C-202	1696	303aa	ENSDARP00000149838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142848.2	SEC22C-201	1108	303aa	ENSDARP00000121545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFN4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,108 bps, Translation length: 303 residues

Version

ENSDART00000142848.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.