Transcript: ENSDART00000142842.3 hoxd12a-202

Description

homeobox D12a [Source:ZFIN;Acc:ZDB-GENE-990415-118]

Gene Synonyms

hoxd-12, hoxd12

Location

About this transcript

This transcript has 3 exons, is annotated with 14 domains and features, is associated with 213 variant alleles and maps to 253 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082339.6	hoxd12a-201	1309	277aa	ENSDARP00000076775.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S5Y9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000142842.3	hoxd12a-202	1396	262aa	ENSDARP00000121699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90471	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,396 bps, Translation length: 262 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q90471

Version

ENSDART00000142842.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.