Transcript: ENSDART00000142820.4 wu:fc21g02-203

Description

wu:fc21g02 [Source:ZFIN;Acc:ZDB-GENE-030131-2925]

Gene Synonyms

fc21g02, fc41f10, si:dkey-9i23.11, wu:fc41f10

Location

Chromosome 1: 44,906,517-44,924,254 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 17 domains and features, is associated with 484 variant alleles and maps to 133 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094133.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142820.4	wu:fc21g02-203	3658	450aa	ENSDARP00000123613.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJU0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182465.1	wu:fc21g02-204	1353	450aa	ENSDARP00000149056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJU0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140402.2	wu:fc21g02-202	548	149aa	ENSDARP00000115185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000135566.2	wu:fc21g02-201	478	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,658 bps, Translation length: 450 residues

Version

ENSDART00000142820.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000142820.4 wu:fc21g02-203

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Transcript: ENSDART00000142820.4 wu:fc21g02-203

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