Transcript: ENSDART00000142808.2 TPI1-201

Description

triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]

Gene Synonyms

DrTPI-B, TIM-B, cb179, wu:fb51c02

Location

About this transcript

This transcript has 4 exons, is associated with 323 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000060056.5	TPI1-203	1348	248aa	ENSDARP00000060055.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132468.3	TPI1-202	720	198aa	ENSDARP00000123659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144649.3	TPI1-204	758	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000142808.2	TPI1-201	525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 525 bps,

Version

ENSDART00000142808.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.