Transcript: ENSDART00000142804.3 arhgap12a-203

Description

Rho GTPase activating protein 12a [Source:ZFIN;Acc:ZDB-GENE-050809-38]

Gene Synonyms

im:7153489, si:ch211-159p3.3

Location

About this transcript

This transcript has 18 exons, is annotated with 43 domains and features, is associated with 1487 variant alleles and maps to 206 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142804.3	arhgap12a-203	3776	831aa	ENSDARP00000122140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P057	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135836.3	arhgap12a-201	1464	488aa	ENSDARP00000117686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QY39	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000138620.2	arhgap12a-202	876	260aa	ENSDARP00000113951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UYK0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,776 bps, Translation length: 831 residues

Version

ENSDART00000142804.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.