Transcript: ENSDART00000142796.2 zgc:153499-202

Description

zgc:153499 [Source:ZFIN;Acc:ZDB-GENE-060825-234]

Gene Synonyms

fi41b10, wu:fi41b10

Location

Chromosome 9: 8,408,098-8,412,072 forward strand.

About this transcript

This transcript has 8 exons, is associated with 155 variant alleles and maps to 86 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000070166.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144373.2	zgc:153499-203	821	219aa	ENSDARP00000116226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R3C9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000102754.5	zgc:153499-201	2339	220aa	ENSDARP00000093530.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0Y8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000178144.2	zgc:153499-204	2245	220aa	ENSDARP00000143355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0Y8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000142796.2	zgc:153499-202	956	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 956 bps,

Version

ENSDART00000142796.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000142796.2 zgc:153499-202

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Transcript: ENSDART00000142796.2 zgc:153499-202

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