Transcript: ENSDART00000142783.2 MAPRE1-203

Description

microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]

Location

Chromosome 8: 23,382,044-23,384,008 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 212 variant alleles and maps to 124 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042927.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000063010.6	MAPRE1-201	1261	272aa	ENSDARP00000063009.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S585	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000180950.1	MAPRE1-206	3437	258aa	ENSDARP00000148035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P020	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000074241.7	MAPRE1-202	1196	258aa	ENSDARP00000068730.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P020	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142783.2	MAPRE1-203	928	132aa	ENSDARP00000113986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000129167.3	MAPRE1-205	826	272aa	ENSDARP00000111083.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S585	-
ENSDART00000146811.2	MAPRE1-204	588	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 928 bps, Translation length: 132 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142783.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000142783.2 MAPRE1-203

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Transcript: ENSDART00000142783.2 MAPRE1-203

Summary

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