Transcript: ENSDART00000142749.2 si:ch211-67e16.4-204

Description

si:ch211-67e16.4 [Source:ZFIN;Acc:ZDB-GENE-070912-311]

Location

Chromosome 9: 14,023,942-14,033,127 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 13 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000086317.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000124267.4	si:ch211-67e16.4-201	2302	496aa	ENSDARP00000105628.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FEY9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140199.2	si:ch211-67e16.4-203	915	255aa	ENSDARP00000115434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142749.2	si:ch211-67e16.4-204	740	246aa	ENSDARP00000120049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000134603.2	si:ch211-67e16.4-202	667	201aa	ENSDARP00000112963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 740 bps, Translation length: 246 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000142749.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000142749.2 si:ch211-67e16.4-204

Summary

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Transcript: ENSDART00000142749.2 si:ch211-67e16.4-204

Summary

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