Transcript: ENSDART00000142734.2 YOD1-202

Description

YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]

Location

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 321 variant alleles and maps to 116 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023388.8	YOD1-201	3450	301aa	ENSDARP00000003565.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q567B1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000177280.2	YOD1-203	3827	301aa	ENSDARP00000143479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q567B1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142734.2	YOD1-202	573	45aa	ENSDARP00000112553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 573 bps, Translation length: 45 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142734.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.