Transcript: ENSDART00000142716.2 NARF-203

Description

nuclear prelamin A recognition factor [Source:ZFIN;Acc:ZDB-GENE-040718-31]

Gene Synonyms

fa03c01, wu:fa03c01, zgc:92186

Location

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 52 variant alleles and maps to 92 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000007053.9	NARF-201	2128	465aa	ENSDARP00000004610.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHP6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142716.2	NARF-203	673	131aa	ENSDARP00000118342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147618.2	NARF-202	808	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 673 bps, Translation length: 131 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142716.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.