Transcript: ENSDART00000142706.2 virma-202

Description

vir like m6A methyltransferase associated [Source:ZFIN;Acc:ZDB-GENE-100922-238]

Gene Synonyms

fa20f07, si:ch211-79l20.4, wu:fa20f07

Location

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 5 variant alleles and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159064.3	virma-203	5544	1847aa	ENSDARP00000131427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IAI1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142215.3	virma-201	5670	1836aa	ENSDARP00000115495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QA29	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000142706.2	virma-202	737	245aa	ENSDARP00000119083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6U3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 737 bps, Translation length: 245 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000142706.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.