Transcript: ENSDART00000142686.2 blm-202

Description

BLM RecQ like helicase [Source:ZFIN;Acc:ZDB-GENE-070702-5]

Location

About this transcript

This transcript has 11 exons, is annotated with 28 domains and features, is associated with 241 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000193226.1	blm-205	5158	1439aa	ENSDARP00000153051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M6YW51	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190779.1	blm-204	5068	1409aa	ENSDARP00000147418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000110746.4	blm-201	4823	1420aa	ENSDARP00000098087.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EZY7	-
ENSDART00000142686.2	blm-202	2795	852aa	ENSDARP00000113634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144783.2	blm-203	412	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,795 bps, Translation length: 852 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142686.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.