Transcript: ENSDART00000142678.4 SLC10A1-201

Description

solute carrier family 10 member 1 [Source:ZFIN;Acc:ZDB-GENE-041001-190]

Location

About this transcript

This transcript has 6 exons, is annotated with 30 domains and features, is associated with 194 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000187274.1	SLC10A1-202	1620	367aa	ENSDARP00000145063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000142678.4	SLC10A1-201	1456	343aa	ENSDARP00000113054.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SPG0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000047826.7	SLC10A1-203	1061	343aa	ENSDARP00000047825.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SPG0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,456 bps, Translation length: 343 residues

Version

ENSDART00000142678.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.