Transcript: ENSDART00000142644.3 TPGS2-203

Description

tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]

Location

About this transcript

This transcript has 6 exons, is associated with 563 variant alleles and maps to 97 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000031658.7	TPGS2-201	1112	290aa	ENSDARP00000030536.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6GMH5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139145.2	TPGS2-202	945	218aa	ENSDARP00000118238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142644.3	TPGS2-203	805	91aa	ENSDARP00000119481.1	Nonsense mediated decay	-	-
ENSDART00000131607.2	TPGS2-204	770	92aa	ENSDARP00000115824.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 805 bps, Translation length: 91 residues

Version

ENSDART00000142644.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.