Transcript: ENSDART00000142638.2 mroh1-203

Description

maestro heat-like repeat family member 1 [Source:ZFIN;Acc:ZDB-GENE-090806-2]

Location

Chromosome 16: 31,259,024-31,284,922 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 11 domains and features, is associated with 720 variant alleles and maps to 123 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000016573.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000178298.2	mroh1-204	8369	1651aa	ENSDARP00000144177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M6Z208	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000018091.9	mroh1-201	8342	1642aa	ENSDARP00000023371.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6I0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000142638.2	mroh1-203	4482	731aa	ENSDARP00000115205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000136648.2	mroh1-202	1910	615aa	ENSDARP00000114188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 4,482 bps, Translation length: 731 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000142638.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000142638.2 mroh1-203

Summary

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Transcript: ENSDART00000142638.2 mroh1-203

Summary

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