Transcript: ENSDART00000142618.2 ckbb-203

Description

creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]

Gene Synonyms

bck, cb594, ckb, wu:fj36f10, wu:fj37d11

Location

Chromosome 20: 20,817,229-20,821,789 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 329 variant alleles and maps to 176 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000043257.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000027603.8	ckbb-201	1464	381aa	ENSDARP00000024900.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8AY63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145601.4	ckbb-204	881	261aa	ENSDARP00000115226.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152577.3	ckbb-207	861	241aa	ENSDARP00000126800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000152118.3	ckbb-205	791	40aa	ENSDARP00000126677.1	Nonsense mediated decay	-	-
ENSDART00000142618.2	ckbb-203	733	118aa	ENSDARP00000126962.1	Nonsense mediated decay	-	-
ENSDART00000152781.3	ckbb-208	947	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000136592.2	ckbb-202	597	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000152288.2	ckbb-206	516	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 733 bps, Translation length: 118 residues

Version

ENSDART00000142618.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000142618.2 ckbb-203

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000142618.2 ckbb-203

Summary

About Us

Get help

Our sister sites

Follow us