Transcript: ENSDART00000142575.3 elocb-204

Description

elongin C paralog b [Source:ZFIN;Acc:ZDB-GENE-040718-138]

Gene Synonyms

fb09f09, tceb1b, wu:fb09f09, zgc:111990, zgc:92635

Location

Chromosome 2: 30,245,853-30,249,785 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 229 variant alleles and maps to 314 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000045359.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142575.3	elocb-204	929	112aa	ENSDARP00000118581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q502M9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184144.1	elocb-206	3239	112aa	ENSDARP00000153381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q502M9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124153.4	elocb-202	933	51aa	ENSDARP00000107171.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000175071.2	elocb-205	343	112aa	ENSDARP00000144253.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000141665.2	elocb-203	834	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000121543.3	elocb-201	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 929 bps, Translation length: 112 residues

Version

ENSDART00000142575.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000142575.3 elocb-204

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Transcript: ENSDART00000142575.3 elocb-204

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