Transcript: ENSDART00000142574.2 CLSTN3-202

Description

calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]

Location

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 873 variant alleles and maps to 28 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110567.6	CLSTN3-201	6932	969aa	ENSDARP00000104134.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000155935.3	CLSTN3-203	3190	956aa	ENSDARP00000128441.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PFP2 A0A9V2TXN1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142574.2	CLSTN3-202	840	280aa	ENSDARP00000120261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 840 bps, Translation length: 280 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000142574.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.