Transcript: ENSDART00000142524.2 chrnb5a-201

Description

cholinergic receptor, nicotinic, beta 5a [Source:ZFIN;Acc:ZDB-GENE-090312-169]

Gene Synonyms

chrnb2a, si:ch211-240p12.2

Location

About this transcript

This transcript has 5 exons, is annotated with 35 domains and features, is associated with 380 variant alleles and maps to 142 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000187834.1	chrnb5a-202	6422	494aa	ENSDARP00000149406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3B0F4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142524.2	chrnb5a-201	1409	469aa	ENSDARP00000121621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,409 bps, Translation length: 469 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000142524.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.