Transcript: ENSDART00000142523.2 ppp1r3b-203

Description

protein phosphatase 1, regulatory subunit 3B [Source:ZFIN;Acc:ZDB-GENE-030131-5496]

Gene Synonyms

wu:fd20c10, wu:fi66d07, zgc:55542

Location

Chromosome 21: 19,917,906-19,919,933 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 304 variant alleles and maps to 191 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044691.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065670.6	ppp1r3b-201	1975	293aa	ENSDARP00000065669.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803M0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180816.1	ppp1r3b-205	942	293aa	ENSDARP00000145267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803M0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137307.2	ppp1r3b-202	908	140aa	ENSDARP00000117744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142523.2	ppp1r3b-203	636	132aa	ENSDARP00000113550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147396.2	ppp1r3b-204	629	193aa	ENSDARP00000121013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 636 bps, Translation length: 132 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142523.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000142523.2 ppp1r3b-203

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Transcript: ENSDART00000142523.2 ppp1r3b-203

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