Transcript: ENSDART00000142522.2 fam234a-202

Description

family with sequence similarity 234 member A [Source:ZFIN;Acc:ZDB-GENE-091204-17]

Gene Synonyms

itfg3, si:dkey-161j23.8

Location

About this transcript

This transcript has 12 exons, is annotated with 4 domains and features, is associated with 680 variant alleles and maps to 166 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105646.6	fam234a-201	1641	546aa	ENSDARP00000096423.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F260	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142522.2	fam234a-202	1729	504aa	ENSDARP00000118151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBK8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000147080.2	fam234a-203	897	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,729 bps, Translation length: 504 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000142522.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.