Transcript: ENSDART00000142514.2 b4galnt1a-202

Description

beta-1,4-N-acetyl-galactosaminyl transferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1462]

Gene Synonyms

zgc:158609

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 245 variant alleles and maps to 67 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000087815.4	b4galnt1a-201	2066	532aa	ENSDARP00000082248.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L229	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142514.2	b4galnt1a-202	788	236aa	ENSDARP00000122229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHK1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 788 bps, Translation length: 236 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142514.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.