Transcript: ENSDART00000142512.2 mcm3ap-203

Description

minichromosome maintenance complex component 3 associated protein [Source:ZFIN;Acc:ZDB-GENE-040715-1]

Location

Chromosome 9: 38,457,806-38,481,481 forward strand.

About this transcript

This transcript has 31 exons, is annotated with 38 domains and features, is associated with 678 variant alleles and maps to 212 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000021402.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000008053.9	mcm3ap-201	9091	2118aa	ENSDARP00000019686.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q712	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000142512.2	mcm3ap-203	6794	2082aa	ENSDARP00000121220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S5L8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000141954.2	mcm3ap-202	686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 31, Coding exons: 30, Transcript length: 6,794 bps, Translation length: 2,082 residues

Version

ENSDART00000142512.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000142512.2 mcm3ap-203

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Transcript: ENSDART00000142512.2 mcm3ap-203

Summary

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