Transcript: ENSDART00000142507.3 CDC42SE2-201

Description

CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 3084 variant alleles and maps to 73 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142507.3	CDC42SE2-201	1941	85aa	ENSDARP00000123282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JR56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165018.2	CDC42SE2-202	1610	85aa	ENSDARP00000142015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JR56	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 1,941 bps, Translation length: 85 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A9JR56

Version

ENSDART00000142507.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.