Transcript: ENSDART00000142462.2 tshz3a-202

Description

teashirt zinc finger homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-100322-1]

Location

About this transcript

This transcript has 1 exon, is annotated with 36 domains and features, is associated with 163 variant alleles and maps to 210 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125979.3	tshz3a-201	3705	1021aa	ENSDARP00000106276.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QL82	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142462.2	tshz3a-202	2895	964aa	ENSDARP00000112946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 2,895 bps, Translation length: 964 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000142462.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.