Transcript: ENSDART00000142450.2 zgc:153219-202

Description

zgc:153219 [Source:ZFIN;Acc:ZDB-GENE-060929-144]

Gene Synonyms

si:ch211-194p6.4

Location

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 237 variant alleles and maps to 118 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142450.2	zgc:153219-202	2165	325aa	ENSDARP00000119142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000073554.7	zgc:153219-201	1002	325aa	ENSDARP00000068044.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYP1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173967.2	zgc:153219-203	847	234aa	ENSDARP00000142909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,165 bps, Translation length: 325 residues

Version

ENSDART00000142450.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.