Transcript: ENSDART00000142440.2 cngk-201

Description

cyclic nucleotide-gated potassium channel [Source:ZFIN;Acc:ZDB-GENE-081107-57]

Gene Synonyms

si:dkey-196h17.4

Location

Chromosome 13: 7,520,362-7,521,304 forward strand.

About this transcript

This transcript has 3 exons, is associated with 126 variant alleles and maps to 33 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000093267.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145073.3	cngk-202	6993	2110aa	ENSDARP00000115153.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QP10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183944.1	cngk-204	6333	2110aa	ENSDARP00000150747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QP10	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145298.2	cngk-203	671	224aa	ENSDARP00000118465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000142440.2	cngk-201	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 571 bps,

Version

ENSDART00000142440.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000142440.2 cngk-201

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Transcript: ENSDART00000142440.2 cngk-201

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