Transcript: ENSDART00000142387.3 pimr58-202

Description

Pim proto-oncogene, serine/threonine kinase, related 58 [Source:ZFIN;Acc:ZDB-GENE-060526-96]

Gene Synonyms

si:ch211-207c6.9

Location

Chromosome 5: 42,381,273-42,388,053 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 1 variant allele and maps to 668 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000109867.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143034.3	pimr58-203	1247	330aa	ENSDARP00000118408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6T6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142387.3	pimr58-202	792	216aa	ENSDARP00000118695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6T7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 792 bps, Translation length: 216 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142387.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000142387.3 pimr58-202

Summary

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Transcript: ENSDART00000142387.3 pimr58-202

Summary

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