Transcript: ENSDART00000142327.2 rabif-203

Description

RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]

Gene Synonyms

wu:fc54e04, zgc:92821

Location

Chromosome 11: 24,816,516-24,817,283 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 9 domains and features, is associated with 130 variant alleles and maps to 241 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000002690.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000115356.4	rabif-201	1062	132aa	ENSDARP00000102249.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141730.3	rabif-202	879	163aa	ENSDARP00000122975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000146838.2	rabif-204	793	145aa	ENSDARP00000117655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142327.2	rabif-203	557	132aa	ENSDARP00000121226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGQ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 557 bps, Translation length: 132 residues

Version

ENSDART00000142327.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000142327.2 rabif-203

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000142327.2 rabif-203

Summary

About Us

Get help

Our sister sites

Follow us