Transcript: ENSDART00000142298.3 slc43a2a-201

Description

solute carrier family 43 member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]

Gene Synonyms

si:dkey-118k5.2, slc43a2, zgc:56271

Location

About this transcript

This transcript has 14 exons, is annotated with 41 domains and features, is associated with 619 variant alleles and maps to 97 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000142298.3	slc43a2a-201	2011	571aa	ENSDARP00000120945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000168453.3	slc43a2a-202	2101	577aa	ENSDARP00000138218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,011 bps, Translation length: 571 residues

Version

ENSDART00000142298.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.